Japan in September Guide to 10 Must-Visit Destinations

Introduction

The weather in September in Japan marks the transition from the hot, humid summer to the cooler, crisper days of autumn. This month offers a unique opportunity to experience the country’s natural beauty, cultural heritage, and vibrant festivals as the landscapes begin to change colors and the weather becomes more pleasant. As an experienced travel editor specializing in Japan, I’m here to guide you through ten of the best destinations to visit in September, each offering something unique for every traveler. From the historic temples of Kyoto Japan to the rugged landscapes of Japan mountains like those in Hokkaido, this guide will help you make the most of your Japanese adventure.

1. Kyoto: The Timeless Beauty of Japan’s Ancient Capital

A Stroll Through Arashiyama Bamboo Grove

Kyoto, Japan’s former capital, is known for its well-preserved temples, traditional tea houses, and serene gardens. In September, the summer crowds begin to thin, and the weather becomes cooler, making it the perfect time to explore this historic Japanese city. One of the must-visit spots is the Arashiyama Bamboo Forest. This enchanting forest, with its towering bamboo stalks swaying gently in the breeze, provides a tranquil escape from the city’s hustle and bustle.

Walking through the Arashiyama Bamboo Forest Kyoto Japan, you’ll feel a sense of calm as the sunlight filters through the bamboo, creating a peaceful atmosphere. September’s milder temperatures make this an ideal time for a leisurely stroll, allowing you to fully immerse yourself in the natural beauty that surrounds you. Don’t miss the nearby Tenryu-ji Temple, a UNESCO World Heritage site, where you can explore the Zen gardens that reflect the changing seasons.

Exploring Kiyomizu-dera Temple

Another iconic Kyoto landmark is Kiyomizu-dera Temple, renowned for its wooden stage that juts out from the main hall, offering breathtaking views of the surrounding hills and the city below. In September, the area is less crowded, giving you a chance to appreciate the temple’s architecture and spiritual significance in a more serene environment.

The temple grounds are extensive, with numerous shrines and smaller temples to explore. As you wander through the complex, take the time to visit the Otowa Waterfall, where visitors drink from one of the three streams for health, longevity, and success. The temple’s setting amidst lush greenery that begins to hint at autumn’s arrival makes it a perfect spot for reflection and photography.

A Relaxing Walk Along the Kamogawa River

For a more relaxed experience, consider taking a walk along the Kamogawa River. The riverbanks are lined with cherry trees, and while they won’t be in bloom in September, the walk offers a peaceful retreat from the city’s more tourist-heavy areas. The gentle breeze and the sound of flowing water create a soothing backdrop as you stroll, and you might even see locals practicing traditional fishing or artists sketching the scenery.

The Kamogawa River is also an excellent place for an evening stroll, especially as the sun sets and the city lights begin to reflect off the water. Several restaurants along the river offer riverside dining, providing a perfect way to end your day in Kyoto.

2. Hakone: A Scenic Getaway With Stunning Views

Unwind in Hakone’s Hot Springs

Located just a short trip from Tokyo, Hakone is a popular destination for those looking to escape the city and enjoy nature. September’s cool weather makes it an ideal time to soak in one of Hakone’s many hot springs (onsen). The area is famous for its therapeutic hot springs, which offer both public baths and private onsen with views of the surrounding mountains.

Hakone’s onsen are often set in ryokan (traditional Japanese inns), where you can experience Japanese hospitality at its finest. Enjoy a relaxing soak in the mineral-rich waters while taking in the serene landscape, which begins to show early signs of autumn. Afterward, indulge in a traditional kaiseki meal, a multi-course dinner that showcases the best of Japanese seasonal cuisine.

Cruise on Lake Ashi

Lake Ashi, with its stunning views of Mount Fuji on clear days, is another highlight of Hakone. In September, the weather is typically clear and crisp, providing excellent visibility of Japan’s iconic mountain. You can take a scenic cruise on one of the lake’s famous pirate ships, which offer a unique and enjoyable way to see the area.

As you sail across the lake, you’ll be surrounded by mountains covered in lush greenery, which gradually begins to change color as autumn approaches. The lake’s tranquil waters reflect the surrounding scenery, creating picture-perfect moments at every turn. After your cruise, visit the Hakone Shrine, located on the lake’s shores, where the red torii gate stands elegantly against the backdrop of the water.

Explore the Volcanic Wonders of Owakudani

Owakudani, also known as the Great Boiling Valley, is a geothermal area in Hakone that offers a unique and dramatic landscape. Formed during a volcanic eruption over 3,000 years ago, Owakudani is still an active volcanic zone, with sulfurous fumes and hot springs bubbling from the ground.

September’s cooler temperatures make it more comfortable to explore this otherworldly landscape, where you can take a short hike to see the steaming vents up close. Be sure to try the famous black eggs (kuro-tamago), which are boiled in the sulfur-rich waters and are said to add seven years to your life. The views from Owakudani are spectacular, especially on clear days when you can see Mount Fuji towering in the distance.

3. Fuji Five Lakes: A Photographer’s Paradise

Discovering the Beauty of Lake Kawaguchi

The Fuji Five Lakes region is one of the best places to view Mount Fuji, and September is an ideal time to visit, with the weather offering clear skies and fewer crowds. Lake Kawaguchi, the most accessible of the five lakes, is particularly beautiful during this time. The lake’s calm waters perfectly mirror the snow-capped peak of Mount Fuji, creating stunning photographic opportunities.

Spend your day exploring the lake’s surroundings, where you can rent a bicycle and ride along the scenic paths, visit local museums, or take a relaxing boat ride on the lake. The Kawaguchiko Music Forest Museum, with its European-style gardens and music boxes, is a charming stop that offers both cultural and scenic experiences.

Water Activities at Lake Yamanaka

Lake Yamanaka, the largest of the Fuji Five Lakes, is a hub for water activities and outdoor adventures. In September, the summer heat has subsided, making it an ideal time for kayaking, fishing, or paddleboarding on the lake’s serene waters. The lake is also surrounded by several hiking trails that offer varying levels of difficulty, allowing you to enjoy the natural beauty of the area at your own pace.

For those interested in birdwatching, Lake Yamanaka is home to a variety of bird species, particularly during the migration season. The lake’s shores provide excellent vantage points for observing these birds in their natural habitat.

A Peaceful Retreat at Lake Saiko

Lake Saiko is often overshadowed by its larger neighbors, but it offers a peaceful and less crowded alternative. This lake is surrounded by dense forests and provides an idyllic setting for camping, hiking, and picnicking. The Aokigahara Forest, also known as the Sea of Trees, is located nearby and is a fascinating place to explore, though it’s best to stick to the marked trails due to the dense nature of the forest.

September is a great time to visit Lake Saiko as the foliage begins to show hints of autumn colors,

adding to the natural beauty of the area. Whether you’re looking for outdoor adventure or quiet reflection, Lake Saiko provides a perfect escape.

4. Hokkaido: The Early Signs of Autumn

Hiking in Daisetsuzan National Park

Hokkaido, Japan’s northernmost island, is known for its stunning natural landscapes, and September is when the first signs of autumn begin to appear. Daisetsuzan National Park, the largest national park in Japan, is a must-visit destination for nature lovers and hikers. The park is home to some of the earliest autumn foliage in Japan, with the leaves starting to change color as early as mid-September.

The park offers numerous hiking trails, ranging from easy walks to challenging mountain climbs. One of the most popular routes is the ascent to Mount Asahi, Hokkaido’s highest peak, which offers breathtaking panoramic views of the surrounding Japan mountains and valleys. The crisp, cool air and the sight of the changing leaves make hiking in Daisetsuzan an unforgettable experience.

Exploring the Scenic Furano and Biei

Furano and Biei, located in central Hokkaido, are famous for their rolling fields, vibrant flower farms, and picturesque landscapes. While the peak flower season is during the summer, September still offers plenty of natural beauty, with the late-blooming flowers and the beginning of the autumn foliage.

Take a scenic drive through the Patchwork Road in Biei, where the colorful fields create a patchwork effect that’s a delight to the eyes. In Furano, visit the local farms to see the last of the lavender and other flowers, and enjoy fresh produce at the local markets. The cooler weather in September also makes it a great time for cycling through the countryside or enjoying a hot air balloon ride for a bird’s-eye view of the stunning scenery.

Relaxing in Noboribetsu Onsen

After a day of exploring, there’s no better way to unwind than by soaking in an onsen. Noboribetsu Onsen, located in southwestern Hokkaido, is one of Japan’s most famous hot spring resorts. The area is known for its diverse types of hot spring waters, each with different therapeutic properties.

In September, the onsen offers a perfect escape from the cooler temperatures, allowing you to relax and rejuvenate while surrounded by the natural beauty of the area. Jigokudani, or Hell Valley, is a volcanic crater near Noboribetsu Onsen that emits steam and hot water, creating a dramatic and awe-inspiring landscape. A walk through this area is both fascinating and a great way to warm up before enjoying the onsen.

5. Kyushu: A Blend of Nature and Culture

Healing Waters in Beppu Onsen

Kyushu, the southernmost of Japan’s main islands, is known for its natural beauty and rich cultural heritage. Beppu, one of Japan’s most famous onsen towns, is a must-visit destination in September. The cooler weather makes it an ideal time to experience Beppu’s hot springs, which are renowned for their healing properties.

Beppu is unique in that it offers a variety of onsen experiences, including mud baths, steam baths, and even sand baths, where you are buried in naturally heated sand. The town is also home to the famous “Hells of Beppu,” a series of dramatic geothermal hot springs that are more for viewing than bathing. Each “hell” is unique, with some featuring bubbling mud, vibrant blue waters, or even a pond filled with crocodiles.

The Majestic Aso Volcano

Another highlight of Kyushu is Mount Aso, one of the world’s largest active volcanoes, located in Kumamoto Prefecture. September is a great time to visit, as the cooler weather allows for comfortable exploration of the area. The Aso Caldera is a stunning natural wonder, and you can take a cable car to the crater’s edge to peer into the steaming abyss.

The surrounding Aso-Kuju National Park offers excellent hiking opportunities, with trails that lead through lush grasslands and volcanic landscapes. The area is also known for its rich agriculture, so be sure to try the local produce, such as Aso’s famous beef and dairy products.

The Spiritual Experience of Takachiho Gorge

Takachiho Gorge, located in Miyazaki Prefecture, is one of Kyushu’s most scenic spots and is steeped in Japanese mythology. The gorge is known for its dramatic cliffs, which rise up on either side of the Gokase River, and its stunning waterfalls. Renting a rowboat and gliding along the river is a peaceful way to take in the beauty of the gorge.

September’s cooler weather makes it an ideal time to explore the area on foot, with walking trails that offer different perspectives of the gorge and its natural beauty. In addition to its natural wonders, Takachiho is also a place of spiritual significance, as it is said to be the site where the sun goddess Amaterasu hid in a cave, bringing darkness to the world. Visiting the Takachiho Shrine and watching a traditional Yokagura dance performance are experiences that connect you with Japan’s rich cultural and spiritual heritage.

6. Mount Koya: A Sacred Pilgrimage Destination

Exploring the Temples of Mount Koya

Mount Koya (Koyasan) is one of Japan’s most sacred sites and a key location for followers of Shingon Buddhism. Located in Wakayama Prefecture, Mount Koya is a serene and spiritual destination, home to over 100 temples and monasteries. September is an ideal time to visit, as the weather is cool and the autumn foliage begins to emerge, adding to the area’s natural beauty.

Visitors to Mount Koya can experience the life of a monk by staying in a temple lodging (shukubo), where you can participate in meditation sessions, morning prayers, and enjoy traditional vegetarian Buddhist cuisine (shojin ryori). The temples are surrounded by ancient cedar trees, and the peaceful atmosphere makes it a perfect retreat for those seeking spiritual renewal.

A Night Walk Through Okunoin Cemetery

One of the most significant and atmospheric places on Mount Koya is Okunoin Cemetery, the largest cemetery in Japan and the resting place of the founder of Shingon Buddhism, Kobo Daishi. The cemetery is home to over 200,000 tombstones and monuments, set amidst towering cedar trees that create a mystical and tranquil environment.

A night walk through Okunoin is a deeply moving experience, as the path is lit by stone lanterns, casting a soft, ethereal glow on the moss-covered tombstones. The cemetery’s atmosphere at night is both serene and eerie, offering a profound connection to Japan’s spiritual traditions.

7. Nara: Ancient Temples and Sacred Deer

Visiting Todai-ji Temple and Nara Park

Nara, Japan’s first permanent capital, is known for its ancient temples and free-roaming deer, which are considered sacred messengers of the gods. Todai-ji Temple, a UNESCO World Heritage site, is home to the Great Buddha (Daibutsu), one of the largest bronze statues of Buddha in the world. The temple’s main hall, Daibutsuden, is an architectural marvel and the largest wooden building in the world.

In September, the weather in Nara is pleasant, making it an ideal time to explore the temple grounds and the surrounding Nara Park. The park is home to hundreds of friendly deer, which are accustomed to visitors and can be fed special deer crackers sold by vendors. The sight of the deer roaming freely among the ancient temples creates a magical atmosphere, blending nature and history.

The Autumn Colors of Yoshino Mountain

While Yoshino Mountain (Yoshinoyama) is best known for its cherry blossoms in spring, it is also a stunning destination in autumn. Located a short distance from Nara, Yoshino is covered with dense forests that begin to change color in late September, creating a breathtaking tapestry of red, orange, and gold.

Yoshino has been a sacred site for over a thousand years and is part of the UNESCO World Heritage-listed “Sacred Sites and Pilgrimage Routes in the Kii Mountain Range.” The mountain is dotted with ancient temples and shrines, and hiking through the area offers both spiritual and natural rewards. The quiet beauty of Yoshino in autumn provides a perfect contrast to the bustling cities, allowing you to experience the tranquil side of Japan’s countryside.

8. Kanazawa: A Glimpse Into Japan’s Feudal Era

Strolling Through Kenrokuen Garden

Kanazawa, located on the western coast of Japan’s Honshu Island, is a city that offers a rich blend of history, culture, and natural beauty. One of the highlights of Kanazawa is Kenrokuen Garden, considered one of Japan’s three most beautiful landscape gardens. September is an excellent time to visit, as the summer heat fades and the garden begins to show the first hints of autumn colors.

Kenrokuen is a meticulously designed garden that combines six traditional attributes of a perfect garden: spaciousness, seclusion, artifice, antiquity, water features, and panoramic views. The garden features winding paths, tranquil ponds, teahouses, and carefully pruned trees, making it a peaceful retreat in the heart of the city. Take your time exploring the garden, enjoying the seasonal flowers and the serene atmosphere.

Exploring Kanazawa Castle

Adjacent to Kenrokuen Garden is Kanazawa Castle, a symbol of the city’s feudal past. The castle was once the seat of the powerful Maeda clan, one of the most influential samurai families during the Edo period. Today, the castle has been partially reconstructed, with its original stone walls and some wooden structures restored to their former glory.

September’s mild weather makes it an ideal time to explore the castle grounds and learn about the history of the samurai who once ruled the region. The castle’s impressive gates,

turrets, and expansive grounds provide a glimpse into Japan’s feudal era, and the views from the castle walls offer a panoramic perspective of the surrounding city and gardens.

9. Oku-Nikko: A Nature Lover’s Paradise

The Serene Beauty of Lake Chuzenji

Oku-Nikko, located in the Nikko National Park, is a haven for nature lovers, offering stunning landscapes, waterfalls, and historical sites. Lake Chuzenji, nestled at the foot of Mount Nantai, is one of the most picturesque spots in the area. In September, the weather is cool and crisp, making it a perfect time to explore the lake and its surroundings.

You can take a leisurely boat ride on Lake Chuzenji, enjoying the reflection of the mountains and the early signs of autumn colors on the water. The lake is also a great spot for fishing, kayaking, and picnicking. Nearby, you’ll find the Kegon Falls, one of Japan’s most famous waterfalls, where the water cascades 97 meters down into the gorge below. The combination of the lake, mountains, and waterfalls makes Oku-Nikko a breathtaking destination.

Hiking in the Senjogahara Marshland

For those who enjoy hiking, the Senjogahara Marshland offers a unique opportunity to experience the natural beauty of Oku-Nikko. This high-altitude marshland is home to a diverse range of flora and fauna, and in September, the grasses and plants begin to change color, creating a golden landscape that is particularly striking.

The Senjogahara hiking trail is well-maintained and suitable for hikers of all levels. The trail takes you through open fields, forests, and along streams, offering stunning views of the surrounding mountains and the marshland itself. The crisp air and the peaceful environment make this hike a refreshing and rejuvenating experience.

10. Shikoku: Untouched Beauty and Rich Tradition

The Remote Beauty of Iya Valley

Shikoku, the smallest of Japan’s main islands, is known for its untouched natural beauty and rich cultural traditions. The Iya Valley, located in Tokushima Prefecture, is one of Japan’s best-kept secrets. This remote and rugged valley is famous for its dramatic landscapes, including steep gorges, vine bridges, and pristine rivers.

September is an ideal time to visit Iya Valley, as the summer heat has subsided, and the early signs of autumn begin to appear. The valley is a paradise for outdoor enthusiasts, with opportunities for hiking, rafting, and exploring the traditional thatched-roof houses that dot the landscape. The Kazurabashi Vine Bridge, one of the most famous sights in the valley, offers a thrilling experience as you cross the swaying bridge suspended over the Iya River.

The Historic Charm of Dogo Onsen

Dogo Onsen, located in Matsuyama on the island of Shikoku, is Japan’s oldest hot spring, with a history that dates back over 3,000 years. The onsen is known for its therapeutic waters and its connection to Japanese literature, having been featured in the works of famous writers such as Natsume Soseki.

September’s cooler weather makes it an ideal time to enjoy a soak in Dogo Onsen’s historic bathhouse, which is an architectural gem in itself. The main bathhouse, Dogo Onsen Honkan, is a wooden structure with a charming, nostalgic atmosphere. After your bath, take a stroll through the surrounding area, where you can explore the quaint streets, visit local shops, and enjoy the relaxing ambiance of this historic onsen town.

Conclusion

September is a wonderful time to explore Japan, with its pleasant weather and the early signs of autumn adding to the country’s natural beauty. From the historic temples of Kyoto and Nara to the stunning landscapes of Hokkaido and Shikoku, there’s something for every traveler to enjoy. Whether you’re seeking cultural experiences, outdoor adventures, or simply a relaxing retreat, these ten destinations offer the perfect blend of history, nature, and tradition. As you plan your journey, remember to embrace the slower pace of travel in Japan, taking the time to fully immerse yourself in the beauty and tranquility that each location has to offer.